ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1273
source: miRBase, original name: hsa-mir-1273e (MI0016059)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCTTGAACCCAGGAAGTGGA miRNA* CAGCCTGGGTGACACAGCGAGA mismatches: 2 bulges: 4 |
pre-miRNA
TGAGGCAGGAGAATTGCTTGAACCCAGGAAGTGGAGGCTGCAGTGAGCCGAGATCGAGCCACTGTACTCCAGCCTGGGTGACACAGCGAGACTCCAGTCT
CA
dot-bracket secondary structure
.(((((.((((..(((((((.(((((((...(((((..(((((((.((((....)).)))))))))))))).)))))))..)).)))))..)))).))))
).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
TGAGGCAGGAGAATTGCTTGAACCCAGGAAGTGGAGGCTGCAGTGAGCCGAGATCGAGCCACTGTACTCCAGCCTGGGTGACACAGCGAGACTCCAGTCT
CA
dot-bracket secondary structure
.(((((.((((..(((((((.(((((((...(((((..(((((((.((((....)).)))))))))))))).)))))))..)).)))))..)))).))))
).
SIMILARITIES| miRBase ppy-mir-1273: 6e-27 PMRD ptc-miRf12524-akr: 0.000001 microPC no hits | UniProt sp|Q8N7M2|ZN283_HUMAN: 0.0000009 RFAM Metazoa_SRP: 7e-27 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
