ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-1972
source: miRBase, original name: hsa-mir-1972-1 (MI0009982)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGGCCAGGCACAGTGGCTCA miRNA* TGCCACCACACCTGGCTTAAAT mismatches: 6 bulges: 0 |
pre-miRNA
TATAGGCATGTGCCACCACACCTGGCTTAAATGTGTCATTTAAAAATTCAGGCCAGGCACAGTGGCTCATGCCTGTA
dot-bracket secondary structure
((((((((((.(((((....((((((((.(((.............))).))))))))....))))).))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Schotte D, Chau JC, Sylvester G, Liu G, Chen C, van der Velden VH, Broekhuis MJ, Peters TC, Pieters R, den Boer ML, Leukemia. 23:313-322(2009)., "Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia"
TATAGGCATGTGCCACCACACCTGGCTTAAATGTGTCATTTAAAAATTCAGGCCAGGCACAGTGGCTCATGCCTGTA
dot-bracket secondary structure
((((((((((.(((((....((((((((.(((.............))).))))))))....))))).))))))))))
SIMILARITIES| miRBase hsa-mir-1972-2: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 0.00000006 |
Identical with: hsa-mir-1972-2 from miRBase (MNEST029199) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Schotte D, Chau JC, Sylvester G, Liu G, Chen C, van der Velden VH, Broekhuis MJ, Peters TC, Pieters R, den Boer ML, Leukemia. 23:313-322(2009)., "Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia"
