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ABOUT THIS RECORD
ID:
MNEST029237
species:
Homo sapiens
miRNA family:
miR-3118
source:
miRBase, original name:
hsa-mir-3118-1
(
MI0014131
)
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTGACTGCATTATGAAAATTCT
miRNA*
AATTTTCATAATGCAATCACACA
mismatches:
2
bulges:
0
View larger
pre-miRNA
CACACTACAAT
AATTTTCATAATGCAATCACACA
TAATCACTA
TGTGACTGCATTATGAAAATTCT
TGTAGTGTG
dot-bracket secondary structure
((((((((((.
(((((((((((((((.(((((..
.........
))))).))))))))))))))).)
)))))))))
SIMILARITIES
miRBase
hsa-mir-3118-3
:
3e-37
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
hsa-mir-3118-2
from miRBase (
MNEST029238
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK,
PLoS One. 5:e9685(2010).
,
"Characterization of the Melanoma miRNAome by Deep Sequencing"