ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-3184
source: miRBase, original name: hsa-mir-3184 (MI0014226)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGGGCCTCAGACCGAGCTTTT miRNA* AAGTCTCGCTCTCTGCCCCTCAGC mismatches: 3 bulges: 2 |
pre-miRNA
AAGCAAGACTGAGGGGCCTCAGACCGAGCTTTTGGAAAATAGAAAAGTCTCGCTCTCTGCCCCTCAGCCTAACTT
dot-bracket secondary structure
(((..((.(((((((((...(((.(((((((((.........))))).)))).)))..))))))))).))..)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK, PLoS One. 5:e9685(2010)., "Characterization of the Melanoma miRNAome by Deep Sequencing"
AAGCAAGACTGAGGGGCCTCAGACCGAGCTTTTGGAAAATAGAAAAGTCTCGCTCTCTGCCCCTCAGCCTAACTT
dot-bracket secondary structure
(((..((.(((((((((...(((.(((((((((.........))))).)))).)))..))))))))).))..)))
SIMILARITIES| miRBase mml-mir-423: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-423: 6e-36 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK, PLoS One. 5:e9685(2010)., "Characterization of the Melanoma miRNAome by Deep Sequencing"
