ABOUT THIS RECORDspecies: Homo sapiens
source: miRBase, original name: hsa-mir-3647 (MI0016047)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAAAATTTTTGTGTGTCTGATC miRNA* AGTGATGATTCACATTCATGTCTCTTC mismatches: 11 bulges: 4 |
pre-miRNA
TTGCTTTCATCAGCCTGAAGTGATGATTCACATTCATGTCTCTTCTCTGATAAATTCTTGAAGAAAATTTTTGTGTGTCTGATCAGGCCTCTAGAGGGCA
G
dot-bracket secondary structure
.(((((((....((((((......(((.((((........(((((...((.....))..))))).......)))).)))...)))))).....)))))))
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
TTGCTTTCATCAGCCTGAAGTGATGATTCACATTCATGTCTCTTCTCTGATAAATTCTTGAAGAAAATTTTTGTGTGTCTGATCAGGCCTCTAGAGGGCA
G
dot-bracket secondary structure
.(((((((....((((((......(((.((((........(((((...((.....))..))))).......)))).)))...)))))).....)))))))
.
SIMILARITIES| miRBase hsa-mir-3647: 1e-52 PMRD no hits microPC no hits | UniProt no hits RFAM SNORD111: 1e-25 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
