ABOUT THIS RECORDspecies: Homo sapiens
source: miRBase, original name: hsa-mir-3653 (MI0016053)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTAAGAAGTTGACTGAAG miRNA* CCTGATGATTCTTCTTCCTGAG mismatches: 8 bulges: 4 |
pre-miRNA
TCCCTGGGGACCCCTGGCAGCCCCTCCTGATGATTCTTCTTCCTGAGCACGCTCATGATGAGCAAACTGAGCCTCTAAGAAGTTGACTGAAGGGGCTGCT
TCCCCAAGGA
dot-bracket secondary structure
(((.((((((.....((((((((((.(........((((((...(((...(((((............)))))))).))))))......).))))))))))
)))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
TCCCTGGGGACCCCTGGCAGCCCCTCCTGATGATTCTTCTTCCTGAGCACGCTCATGATGAGCAAACTGAGCCTCTAAGAAGTTGACTGAAGGGGCTGCT
TCCCCAAGGA
dot-bracket secondary structure
(((.((((((.....((((((((((.(........((((((...(((...(((((............)))))))).))))))......).))))))))))
)))))).)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SNORD125: 3e-48 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E, Nucleic Acids Res. 38:6234-6246(2010)., "Discovery of microRNAs and other small RNAs in solid tumors"
