miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST029449
species: Homo sapiens
miRNA family: miR-3680
source: miRBase, original name: hsa-mir-3680 (MI0016081)

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACTCACTCACAGGATTGTGCA

miRNA*
CATGACCCTGGGAGTAGGTGCC

mismatches: 7
bulges: 0

View larger
pre-miRNA
AAATTTAAGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTGCATGACCCTGGGAGTAGGTGCCTCCTTAAATTT

dot-bracket secondary structure
(((((((((((((.((..((((.((((.(..((((((.((.......)).))))))..).)))).))))..)).)))))))))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A, BMC Genomics. 11:288(2010)., "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood"




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