ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-3680
source: miRBase, original name: hsa-mir-3680 (MI0016081)
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GACTCACTCACAGGATTGTGCA miRNA* CATGACCCTGGGAGTAGGTGCC mismatches: 7 bulges: 0 |
pre-miRNA
AAATTTAAGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTGCATGACCCTGGGAGTAGGTGCCTCCTTAAATTT
dot-bracket secondary structure
(((((((((((((.((..((((.((((.(..((((((.((.......)).))))))..).)))).))))..)).)))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A, BMC Genomics. 11:288(2010)., "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood"
AAATTTAAGGAGGGACTCACTCACAGGATTGTGCAAATGCAAAGTTGGCTTTTGCATGACCCTGGGAGTAGGTGCCTCCTTAAATTT
dot-bracket secondary structure
(((((((((((((.((..((((.((((.(..((((((.((.......)).))))))..).)))).))))..)).)))))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A, BMC Genomics. 11:288(2010)., "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood"
