ABOUT THIS RECORDspecies: Pan paniscus
miRNA family: mir-7
source: miRBase, original name: ppa-mir-7-2 (MI0002784)
SEQUENCE & STRUCTURE| miRNA TGGAAGACTAGTGATTTTGTT miRNA* CAAATCCCAGTCTACCTAA mismatches: 3 bulges: 2 |
pre-miRNA
CTGGATACAGAGCGGACCAGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCTCAACAACAAATCCCAGTCTACCTAATGGTGCC
AGCCATCACA
dot-bracket secondary structure
(((....)))....((...((((((.((((..((.(((((.(.(((((.(((((((............))))))))))))).))))).))..)))).)))
)))..))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CTGGATACAGAGCGGACCAGCTGGCCCCATCTGGAAGACTAGTGATTTTGTTGTTGTCTTACTGCGCTCAACAACAAATCCCAGTCTACCTAATGGTGCC
AGCCATCACA
dot-bracket secondary structure
(((....)))....((...((((((.((((..((.(((((.(.(((((.(((((((............))))))))))))).))))).))..)))).)))
)))..))...
SIMILARITIES| miRBase ptr-mir-7-2: 4e-53 PMRD no hits microPC no hits | UniProt no hits RFAM mir-7: 8e-33 |
Identical with: hsa-mir-3529 from miRBase (MNEST029376) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
