ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: let-7
source: miRBase, original name: ptr-let-7b (MI0008400)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGGTTGTGTGGTT miRNA* CTATACAACCTACTGCCTTCCC mismatches: 1 bulges: 0 |
pre-miRNA
GGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCTCAGAAGATAACTATACAACCTACTGCCTTCCCTG
dot-bracket secondary structure
((((.(((((((((((((((((((((((.((((((.....))))))....))....))))))))))))))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCTCAGAAGATAACTATACAACCTACTGCCTTCCCTG
dot-bracket secondary structure
((((.(((((((((((((((((((((((.((((((.....))))))....))....))))))))))))))))))))))))).
SIMILARITIES| miRBase mml-let-7b: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 6e-36 |
Identical with: ppy-let-7b from miRBase (MNEST030734) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
