ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: let-7
source: miRBase, original name: ptr-let-7g (MI0008406)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAGTTTGTACAGTT miRNA* CTGTACAGGCCACTGCCTTGCC mismatches: 2 bulges: 0 |
pre-miRNA
AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCC
dot-bracket secondary structure
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGGCTGAGGTAGTAGTTTGTACAGTTTGAGGGTCTATGATACCACCCGGTACAGGAGATAACTGTACAGGCCACTGCCTTGCC
dot-bracket secondary structure
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))
SIMILARITIES| miRBase gga-let-7g: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 1e-40 |
Identical with: mmu-let-7g from miRBase (MNEST031761) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
