ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1
source: miRBase, original name: ptr-mir-1-1 (MI0008412)
SEQUENCE & STRUCTURE| miRNA TGGAATGTAAAGAAGTATGTAT miRNA* ACATACTTCTTTATATGCCCATA mismatches: 2 bulges: 1 |
pre-miRNA
GGGAAACATACTTCTTTATATGCCCATATGGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATCTCA
dot-bracket secondary structure
((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGGAAACATACTTCTTTATATGCCCATATGGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATCTCA
dot-bracket secondary structure
((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))).
SIMILARITIES| miRBase mml-mir-1-1: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1: 7e-26 |
Identical with: mml-mir-1-1 from miRBase (MNEST027640) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
