ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-7
source: miRBase, original name: ptr-mir-7-1 (MI0008853)
SEQUENCE & STRUCTURE| miRNA TGGAAGACTAGTGATTTTGTTGT miRNA* AACAAATCACAGTCTGCCATA mismatches: 1 bulges: 2 |
pre-miRNA
TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT
GCCTCTACA
dot-bracket secondary structure
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).
)).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTGGATGTTGGCCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAACTAAATCGACAACAAATCACAGTCTGCCATATGGCACAGGCCAT
GCCTCTACA
dot-bracket secondary structure
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).
)).))))..
SIMILARITIES| miRBase lla-mir-7: 3e-57 PMRD no hits microPC no hits | UniProt no hits RFAM mir-7: 4e-38 |
Identical with: cfa-mir-7-1 from miRBase (MNEST026615) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
