ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-9
source: miRBase, original name: ptr-mir-9-1 (MI0008875)
SEQUENCE & STRUCTURE| miRNA TCTTTGGTTATCTAGCTGTATGA miRNA* ATAAAGCTAGATAACCGAAAGTA mismatches: 3 bulges: 0 |
pre-miRNA
CGGGGTTGGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGGTGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAACCCC
dot-bracket secondary structure
.(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CGGGGTTGGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGGTGTGGAGTCTTCATAAAGCTAGATAACCGAAAGTAAAAATAACCCC
dot-bracket secondary structure
.(((((((....(((..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))..)))...)))))))
SIMILARITIES| miRBase mml-mir-9-1: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-9: 6e-24 |
Identical with: mml-mir-9-1 from miRBase (MNEST027645) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
