ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-10
source: miRBase, original name: ptr-mir-10a (MI0008410)
SEQUENCE & STRUCTURE| miRNA TACCCTGTAGATCCGAATTTGTG miRNA* CAAATTCGTATCTAGGGGAATA mismatches: 2 bulges: 1 |
pre-miRNA
ATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACA
CTCCGCTCT
dot-bracket secondary structure
...(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...)))
.........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATCTGTCTGTCTTCTGTATATACCCTGTAGATCCGAATTTGTGTAAGGAATTTTGTGGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACA
CTCCGCTCT
dot-bracket secondary structure
...(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...)))
.........
SIMILARITIES| miRBase ggo-mir-10a: 3e-57 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 5e-34 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
