ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-15
source: miRBase, original name: ptr-mir-16-2 (MI0008555)
SEQUENCE & STRUCTURE| miRNA TAGCAGCACGTAAATATTGGCG miRNA* CCAATATTACTGTGCTGCTTTA mismatches: 4 bulges: 0 |
pre-miRNA
TTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATGTTAAACACCAATATTACTGTGCTGCTTTAGTGTGAC
dot-bracket secondary structure
.((((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..)))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTCCACTCTAGCAGCACGTAAATATTGGCGTAGTGAAATATATGTTAAACACCAATATTACTGTGCTGCTTTAGTGTGAC
dot-bracket secondary structure
.((((((..(((((((((..((((((((.((..(((........))).)).))))))))..)))))))))..)))).)).
SIMILARITIES| miRBase hsa-mir-16-2: 9e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-16: 2e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
