ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-23
source: miRBase, original name: ptr-mir-23b (MI0002499)
SEQUENCE & STRUCTURE| miRNA ATCACATTGCCAGGGATTACCAC miRNA* GGGTTCCTGGCATGCTGATTT mismatches: 1 bulges: 4 |
pre-miRNA
CTCAGGTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTAAGATTAAAATCACATTGCCAGGGATTACCACGCAACCACGACCTTGGC
dot-bracket secondary structure
.(((((.(.(((((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
CTCAGGTGCTCTGGCTGCTTGGGTTCCTGGCATGCTGATTTGTGACTTAAGATTAAAATCACATTGCCAGGGATTACCACGCAACCACGACCTTGGC
dot-bracket secondary structure
.(((((.(.(((((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).))).)))))))).
SIMILARITIES| miRBase mml-mir-23b: 3e-50 PMRD no hits microPC no hits | UniProt no hits RFAM mir-23: 3e-26 |
Identical with: cfa-mir-23b from miRBase (MNEST026638) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
