ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-26
source: miRBase, original name: ptr-mir-26b (MI0008590)
SEQUENCE & STRUCTURE| miRNA TTCAAGTAATTCAGGATAGGT miRNA* CTGTTCTCCATTACTTGGCT mismatches: 2 bulges: 1 |
pre-miRNA
CGGGACCCAGTTCAAGTAATTCAGGATAGGTTGTGTGCTGTCCAGCCTGTTCTCCATTACTTGGCTCGGGGACCGG
dot-bracket secondary structure
(((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CGGGACCCAGTTCAAGTAATTCAGGATAGGTTGTGTGCTGTCCAGCCTGTTCTCCATTACTTGGCTCGGGGACCGG
dot-bracket secondary structure
(((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..))).
SIMILARITIES| miRBase mml-mir-26b: 8e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-26: 2e-32 |
Identical with: cfa-mir-26b from miRBase (MNEST026644) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
