ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-29
source: miRBase, original name: ptr-mir-29a (MI0002661)
SEQUENCE & STRUCTURE| miRNA CTAGCACCATCTGAAATCGGTT miRNA* CTGATTTCTTTTGGTGTTCAGAG mismatches: 3 bulges: 1 |
pre-miRNA
ATGACTGATTTCTTTTGGTGTTCAGAGTCAATATAATTTTCTAGCACCATCTGAAATCGGTTAT
dot-bracket secondary structure
((((((((((((...(((((((.((((...........)))))))))))...))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ATGACTGATTTCTTTTGGTGTTCAGAGTCAATATAATTTTCTAGCACCATCTGAAATCGGTTAT
dot-bracket secondary structure
((((((((((((...(((((((.((((...........)))))))))))...))))))))))))
SIMILARITIES| miRBase eca-mir-29a: 9e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-29: 2e-22 |
Identical with: cfa-mir-29a from miRBase (MNEST026648) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
