ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-29
source: miRBase, original name: ptr-mir-29c (MI0008595)
SEQUENCE & STRUCTURE| miRNA TAGCACCATTTGAAATCGGTTA miRNA* ACCGATTTCTCCTGGTGTTCAG mismatches: 4 bulges: 0 |
pre-miRNA
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGG
dot-bracket secondary structure
..((((((((((...(((((((((((...((((((((((((.....)))))...)))))))...))))))))))))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATCTCTTACACAGGCTGACCGATTTCTCCTGGTGTTCAGAGTCTGTTTTTGTCTAGCACCATTTGAAATCGGTTATGATGTAGGGGG
dot-bracket secondary structure
..((((((((((...(((((((((((...((((((((((((.....)))))...)))))))...))))))))))))).)))))))).
SIMILARITIES| miRBase eca-mir-29c: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-29: 5e-18 |
Identical with: eca-mir-29c from miRBase (MNEST026973) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
