ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-34
source: miRBase, original name: ptr-mir-34c (MI0008633)
SEQUENCE & STRUCTURE| miRNA AATCACTAACCACACGGCCAGG miRNA* AGGCAGTGTAGTTAGCTGATTGC mismatches: 3 bulges: 1 |
pre-miRNA
GTCTAGTTACTAGGCAGTGTAGTTAGCTGATTGCTAATAGTACCAATCACTAACCACACGGCCAGGTAAAAAGATT
dot-bracket secondary structure
((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTCTAGTTACTAGGCAGTGTAGTTAGCTGATTGCTAATAGTACCAATCACTAACCACACGGCCAGGTAAAAAGATT
dot-bracket secondary structure
((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))).
SIMILARITIES| miRBase hsa-mir-34c: 8e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-34: 9e-32 |
Identical with: hsa-mir-34c from miRBase (MNEST028403) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
