ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-25
source: miRBase, original name: ptr-mir-92-2 (MI0003114)
SEQUENCE & STRUCTURE| miRNA TATTGCACTTGTCCCGGCCTGT miRNA* CCCTGGGTGGGGATTTGTTGCATTACT mismatches: 4 bulges: 5 |
pre-miRNA
TCATCCCTGGGTGGGGATTTGTTGCATTACTTGTGTTCCACAAAAGTATTGCACTTGTCCCGGCCTGTGAGAGA
dot-bracket secondary structure
((((....((((.(((((..((.(((.(((((.((.....)).))))).)))))..))))).))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
TCATCCCTGGGTGGGGATTTGTTGCATTACTTGTGTTCCACAAAAGTATTGCACTTGTCCCGGCCTGTGAGAGA
dot-bracket secondary structure
((((....((((.(((((..((.(((.(((((.((.....)).))))).)))))..))))).))))))))....
SIMILARITIES| miRBase age-mir-92-2: 1e-24 PMRD no hits microPC no hits | UniProt no hits RFAM mir-92: 2e-35 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
