ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-96
source: miRBase, original name: ptr-mir-96 (MI0003087)
SEQUENCE & STRUCTURE| miRNA TTTGGCACTAGCACATTTTTGC miRNA* AATCATGTGCAGTGCCAATAT mismatches: 3 bulges: 1 |
pre-miRNA
TGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTCTGAGCAATCATGTGCAGTGCCAATATGGGAAA
dot-bracket secondary structure
...((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
TGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCGCTCTGAGCAATCATGTGCAGTGCCAATATGGGAAA
dot-bracket secondary structure
...((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))...
SIMILARITIES| miRBase cfa-mir-96: 5e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-96: 1e-37 |
Identical with: ppa-mir-96 from miRBase (MNEST030077) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
