ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: let-7
source: miRBase, original name: ptr-mir-98 (MI0002697)
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTAAGTTGTATTGTT miRNA* CTATACAACTTACTACTTTCCC mismatches: 2 bulges: 0 |
pre-miRNA
AGGATTCTGCTCATGCCAGGGTGAGGTAGTAAGTTGTATTGTTGTGGGGTAGGGATATTAGGCCCCAATTAGAAGATAACTATACAACTTACTACTTTCC
CTGGTGTGTGGCATATTCA
dot-bracket secondary structure
.((((..((((((((((((((.(((((((((((((((((.((((((((((...........)))))).........)))).)))))))))))))))))))
)))))))).)))).)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
AGGATTCTGCTCATGCCAGGGTGAGGTAGTAAGTTGTATTGTTGTGGGGTAGGGATATTAGGCCCCAATTAGAAGATAACTATACAACTTACTACTTTCC
CTGGTGTGTGGCATATTCA
dot-bracket secondary structure
.((((..((((((((((((((.(((((((((((((((((.((((((((((...........)))))).........)))).)))))))))))))))))))
)))))))).)))).)))).
SIMILARITIES| miRBase hsa-mir-98: 3e-63 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 2e-36 |
Identical with: ppa-mir-98 from miRBase (MNEST030078) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
