ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-99
source: miRBase, original name: ptr-mir-99b (MI0008891)
SEQUENCE & STRUCTURE| miRNA CACCCGTAGAACCGACCTTGCG miRNA* CAAGCTCGTGTCTGTGGGTCCG mismatches: 5 bulges: 0 |
pre-miRNA
GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC
dot-bracket secondary structure
((((..(((((((((..(((.((((.(((((....))).).).)))).)))..)))))))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC
dot-bracket secondary structure
((((..(((((((((..(((.((((.(((((....))).).).)))).)))..)))))))))..)))).
SIMILARITIES| miRBase eca-mir-99b: 1e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 2e-32 |
Identical with: mmu-mir-99b from miRBase (MNEST031826) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
