ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-122
source: miRBase, original name: ptr-mir-122 (MI0008431)
SEQUENCE & STRUCTURE| miRNA TGGAGTGTGACAATGGTGTTTG miRNA* AACGCCATTATCACACTAAATA mismatches: 3 bulges: 0 |
pre-miRNA
CTTAGCAGAGCTGTGGAGTGTGACAATGGTGTTTGTGTCTAAATTATCAAACGCCATTATCACACTAAATAGCTACTGCTAGGC
dot-bracket secondary structure
((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTTAGCAGAGCTGTGGAGTGTGACAATGGTGTTTGTGTCTAAATTATCAAACGCCATTATCACACTAAATAGCTACTGCTAGGC
dot-bracket secondary structure
((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).
SIMILARITIES| miRBase hsa-mir-122: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-122: 5e-21 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
