ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-126
source: miRBase, original name: ptr-mir-126 (MI0008465)
SEQUENCE & STRUCTURE| miRNA TCGTACCGTGAGTAATAATGCG miRNA* ACATTATTACTTTTGGTACGCGC mismatches: 3 bulges: 1 |
pre-miRNA
GCTGGCGACGGGACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCCGTCCACGGCA
dot-bracket secondary structure
((((..((((((.(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))).)))))..)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCTGGCGACGGGACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGCCGTCCACGGCA
dot-bracket secondary structure
((((..((((((.(((((((((((.(((((((.(...(((....)))..).))))))).)))))))))))).)))))..)))).
SIMILARITIES| miRBase hsa-mir-126: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-126: 2e-26 |
Identical with: cfa-mir-126 from miRBase (MNEST026692) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
