ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-128
source: miRBase, original name: ptr-mir-128-2 (MI0008482)
SEQUENCE & STRUCTURE| miRNA TCACAGTGAACCGGTCTCTTT miRNA* GGGGGCCGATACACTGTACGAGA mismatches: 3 bulges: 2 |
pre-miRNA
GTGCAGTGGGAAGGGGGGCCGATACACTGTACGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTGTGTC
dot-bracket secondary structure
(..(((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).)))))))..).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GTGCAGTGGGAAGGGGGGCCGATACACTGTACGAGAGTGAGTAGCAGGTCTCACAGTGAACCGGTCTCTTTCCCTACTGTGTC
dot-bracket secondary structure
(..(((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).)))))))..).
SIMILARITIES| miRBase mml-mir-128b: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-128: 2e-33 |
Identical with: cfa-mir-128-2 from miRBase (MNEST026695) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
