ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-129
source: miRBase, original name: ptr-mir-129-2 (MI0008494)
SEQUENCE & STRUCTURE| miRNA CTTTTTGCGGTCTGGGCTTGC miRNA* CGGAAGCCCTTACCCCAAAAAGCA mismatches: 3 bulges: 3 |
pre-miRNA
GCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTTGCGGAGGGCG
dot-bracket secondary structure
((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGTACATAACTCAATAGCCGGAAGCCCTTACCCCAAAAAGCATTTGCGGAGGGCG
dot-bracket secondary structure
((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).
SIMILARITIES| miRBase hsa-mir-129-2: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-129: 2e-26 |
Identical with: hsa-mir-129-2 from miRBase (MNEST028441) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
