ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-134
source: miRBase, original name: ptr-mir-134 (MI0008535)
SEQUENCE & STRUCTURE| miRNA TGTGACTGGTTGACCAGAGGGG miRNA* CACCCTGTGGGCCACCTAGTCACCAA mismatches: 4 bulges: 4 |
pre-miRNA
AGGGTGTGTGACTGGTTGACCAGAGGGGCATGCACTGTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTC
dot-bracket secondary structure
(((((..((((((((.((.(((.((((((((.....))))...)))).)))..)).))))))))..))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGGGTGTGTGACTGGTTGACCAGAGGGGCATGCACTGTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTC
dot-bracket secondary structure
(((((..((((((((.((.(((.((((((((.....))))...)))).)))..)).))))))))..))))).
SIMILARITIES| miRBase mne-mir-134: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-134: 1e-24 |
Identical with: ppa-mir-134 from miRBase (MNEST030092) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
