ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-8
source: miRBase, original name: ptr-mir-141-1 (MI0008541)
SEQUENCE & STRUCTURE| miRNA TAACACTGTCTGGTAAAGATGG miRNA* ATCTTCCAGTACAGTGTTGGA mismatches: 1 bulges: 3 |
pre-miRNA
GGCCGGCCCTGGGTCCATCTTCCAGTACAGTGTTGGATGGTCTAATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCCCCCGGGTGGGTTC
dot-bracket secondary structure
((((.((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).)))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GGCCGGCCCTGGGTCCATCTTCCAGTACAGTGTTGGATGGTCTAATTGTGAAGCTCCTAACACTGTCTGGTAAAGATGGCCCCCGGGTGGGTTC
dot-bracket secondary structure
((((.((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).)))).)))).
SIMILARITIES| miRBase ggo-mir-141: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-8: 4e-31 |
Identical with: eca-mir-141 from miRBase (MNEST027040) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
