ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-146
source: miRBase, original name: ptr-mir-146b (MI0008545)
SEQUENCE & STRUCTURE| miRNA TGAGAACTGAATTCCATAGGCT miRNA* CCTGTGGACTCAGTTCTGGT mismatches: 3 bulges: 2 |
pre-miRNA
CTGGCACTGAGAACTGAATTCCATAGGCTGTGAGCTCTAGCAATGCCCTGTGGACTCAGTTCTGGTGCCCGG
dot-bracket secondary structure
(.((((((.((((((((..((((((((..((..((....)).))..)))))))).)))))))))))))).).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTGGCACTGAGAACTGAATTCCATAGGCTGTGAGCTCTAGCAATGCCCTGTGGACTCAGTTCTGGTGCCCGG
dot-bracket secondary structure
(.((((((.((((((((..((((((((..((..((....)).))..)))))))).)))))))))))))).).
SIMILARITIES| miRBase mml-mir-146b: 2e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-146: 3e-34 |
Identical with: hsa-mir-146b from miRBase (MNEST028467) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
