ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-147
source: miRBase, original name: ptr-mir-147b (MI0008546)
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAATGCTTCTGCTA miRNA* GTGGAAACATTTCTGCACAAACTAGATTCTG mismatches: 3 bulges: 9 |
pre-miRNA
ATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGACACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGG
dot-bracket secondary structure
..((((.(((..(((.((((((((((((.........((((...)))))))))))))))).)))..))).)))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ATAAATCTAGTGGAAACATTTCTGCACAAACTAGATTCTGGACACCAGTGTGCGGAAATGCTTCTGCTACATTTTTAGG
dot-bracket secondary structure
..((((.(((..(((.((((((((((((.........((((...)))))))))))))))).)))..))).)))).....
SIMILARITIES| miRBase hsa-mir-147b: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 1e-18 |
Identical with: hsa-mir-147b from miRBase (MNEST028470) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
