ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-148
source: miRBase, original name: ptr-mir-148a (MI0008547)
SEQUENCE & STRUCTURE| miRNA TCAGTGCACTACAGAACTTTGT miRNA* AAAGTTCTGAGACACTCCGACT mismatches: 1 bulges: 4 |
pre-miRNA
GAGGCAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCT
dot-bracket secondary structure
.(((((((((((((((.((((..(((((((.......))).))))))))..)).)))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GAGGCAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCACTACAGAACTTTGTCT
dot-bracket secondary structure
.(((((((((((((((.((((..(((((((.......))).))))))))..)).)))))))))))))
SIMILARITIES| miRBase mml-mir-148a: 2e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-148: 3e-31 |
Identical with: mml-mir-148a from miRBase (MNEST027756) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
