ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-28
source: miRBase, original name: ptr-mir-151 (MI0008551)
SEQUENCE & STRUCTURE| miRNA CTAGACTGAAGCTCCTTGAGG miRNA* TCGAGGAGCTCACAGTCTAGTA mismatches: 1 bulges: 1 |
pre-miRNA
TTTCCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCATCCCCTACTAGACTGAAGCTCCTTGAGGACAGGGATGGTCATACTCACCT
dot-bracket secondary structure
.((((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).)))))).(((.......))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TTTCCTGCCCTCGAGGAGCTCACAGTCTAGTATGTCTCATCCCCTACTAGACTGAAGCTCCTTGAGGACAGGGATGGTCATACTCACCT
dot-bracket secondary structure
.((((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).)))))).(((.......))).
SIMILARITIES| miRBase mml-mir-151: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-28: 3e-35 |
Identical with: mml-mir-151 from miRBase (MNEST027761) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
