ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-153
source: miRBase, original name: ptr-mir-153 (MI0008553)
SEQUENCE & STRUCTURE| miRNA TTGCATAGTCACAAAAGTGATC miRNA* CATTTTTGTGATGTTGCAGCT mismatches: 3 bulges: 0 |
pre-miRNA
AGCGGTGGCCAGTGTCATTTTTGTGATGTTGCAGCTAGTAATATGAGCCCAGTTGCATAGTCACAAAAGTGATCATTGGAAACTGT
dot-bracket secondary structure
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
AGCGGTGGCCAGTGTCATTTTTGTGATGTTGCAGCTAGTAATATGAGCCCAGTTGCATAGTCACAAAAGTGATCATTGGAAACTGT
dot-bracket secondary structure
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..)))))
SIMILARITIES| miRBase mml-mir-153-2: 1e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-153: 4e-37 |
Identical with: mml-mir-153-2 from miRBase (MNEST027764) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
