ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-181
source: miRBase, original name: ptr-mir-181d (MI0008557)
SEQUENCE & STRUCTURE| miRNA AACATTCATTGTTGTCGGTGGGT miRNA* CCACCGGGGGATGAATGTCAC mismatches: 2 bulges: 2 |
pre-miRNA
TCCCCTCCCCTAGGCCACAGCCGAGGTCACAATCAACATTCATTGTTGTCGGTGGGTTGTGAGGACCGAGGCCAGACCCACCGGGGGATGAATGTCACTG
TGGCTGGGCCAGACATGGCTTAAGGGGAATGGGGAC
dot-bracket secondary structure
(((((((((((((((((..(((..(((((((....(((((((((.(..((((((((((....((.(....))).))))))))))).)))))))))...))
))))).)))......)))))).))))))..))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TCCCCTCCCCTAGGCCACAGCCGAGGTCACAATCAACATTCATTGTTGTCGGTGGGTTGTGAGGACCGAGGCCAGACCCACCGGGGGATGAATGTCACTG
TGGCTGGGCCAGACATGGCTTAAGGGGAATGGGGAC
dot-bracket secondary structure
(((((((((((((((((..(((..(((((((....(((((((((.(..((((((((((....((.(....))).))))))))))).)))))))))...))
))))).)))......)))))).))))))..))))).
SIMILARITIES| miRBase mml-mir-181d: 1e-68 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.0000000000005 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
