ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-190
source: miRBase, original name: ptr-mir-190b (MI0008563)
SEQUENCE & STRUCTURE| miRNA TGATATGTTTGATATTGGGTT miRNA* CTAAATGTCAAACATATTCTT mismatches: 2 bulges: 0 |
pre-miRNA
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTACAGCAGCA
dot-bracket secondary structure
.(((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGCTTCTGTGTGATATGTTTGATATTGGGTTGTTTAATTAGGAACCAACTAAATGTCAAACATATTCTTACAGCAGCA
dot-bracket secondary structure
.(((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))).
SIMILARITIES| miRBase hsa-mir-190b: 5e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-190: 6e-33 |
Identical with: hsa-mir-190b from miRBase (MNEST028498) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
