ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-202
source: miRBase, original name: ptr-mir-202 (MI0008574)
SEQUENCE & STRUCTURE| miRNA AGAGGTATAGGGCATGGGAA miRNA* CCTATGCATATACTTCTTT mismatches: 1 bulges: 1 |
pre-miRNA
CTCCTCAGAGCCGCCCGCCGTTCCTTTTTCCTATGCATATACTTCTTTGAGGATCTGGCCTAAAGAGGTATAGGGCATGGGAAAACGGGGCGGTCGGGTC
CTCCCCAGC
dot-bracket secondary structure
.......(((..((((((((((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).))))))).))))).
)))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CTCCTCAGAGCCGCCCGCCGTTCCTTTTTCCTATGCATATACTTCTTTGAGGATCTGGCCTAAAGAGGTATAGGGCATGGGAAAACGGGGCGGTCGGGTC
CTCCCCAGC
dot-bracket secondary structure
.......(((..((((((((((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).))))))).))))).
)))......
SIMILARITIES| miRBase hsa-mir-202: 4e-56 PMRD no hits microPC no hits | UniProt no hits RFAM mir-202: 1e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
