ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-203
source: miRBase, original name: ptr-mir-203 (MI0008575)
SEQUENCE & STRUCTURE| miRNA GTGAAATGTTTAGGACCACTAG miRNA* AGTGGTTCTTAACAGTTCAACAG mismatches: 3 bulges: 1 |
pre-miRNA
TGTTGGGGACTCGCGCGCTGGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACTCGGCGGGCGCGG
CGACAGCGA
dot-bracket secondary structure
.((((..(.(.(((.(((((((((.(((((((((.((((.((((.((((((......).))))))))).)))).))))))))).))))))))).))).).
)..))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
TGTTGGGGACTCGCGCGCTGGGTCCAGTGGTTCTTAACAGTTCAACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACTCGGCGGGCGCGG
CGACAGCGA
dot-bracket secondary structure
.((((..(.(.(((.(((((((((.(((((((((.((((.((((.((((((......).))))))))).)))).))))))))).))))))))).))).).
)..))))..
SIMILARITIES| miRBase hsa-mir-203: 6e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-203: 3e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
