ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-1
source: miRBase, original name: ptr-mir-206 (MI0008576)
SEQUENCE & STRUCTURE| miRNA TGGAATGTAAGGAAGTGTGTGG miRNA* ACATGCTTCTTTATATCCCCATA mismatches: 1 bulges: 1 |
pre-miRNA
GCTTCCCGAGGCCACATGCTTCTTTATATCCCCATATGGATTACTTTGCTATGGAATGTAAGGAAGTGTGTGGTTTCGGCAAGTG
dot-bracket secondary structure
((((.((((((((((((((((((((((((..(((((.(.(......).)))))).)))))))))))))))))))))))).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCTTCCCGAGGCCACATGCTTCTTTATATCCCCATATGGATTACTTTGCTATGGAATGTAAGGAAGTGTGTGGTTTCGGCAAGTG
dot-bracket secondary structure
((((.((((((((((((((((((((((((..(((((.(.(......).)))))).)))))))))))))))))))))))).)))).
SIMILARITIES| miRBase mml-mir-206: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1: 2e-30 |
Identical with: mne-mir-206 from miRBase (MNEST028234) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
