ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-210
source: miRBase, original name: ptr-mir-210 (MI0008580)
SEQUENCE & STRUCTURE| miRNA CTGTGCGTGTGACAGCGGCTGA miRNA* AGCCCCTGCCCACCGCACACTG mismatches: 4 bulges: 2 |
pre-miRNA
ACCCGGCAGTCCCTCCAGGCGCAGGGCAGCCCCTGCCCACCGCACACTGCGCTGCCCCAGACCCACTGTGCGTGTGACAGCGGCTGATCTGTGCCTGGGC
AGCGCGACC
dot-bracket secondary structure
.....((.((..(.((((((((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..))))))))))).
.))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
ACCCGGCAGTCCCTCCAGGCGCAGGGCAGCCCCTGCCCACCGCACACTGCGCTGCCCCAGACCCACTGTGCGTGTGACAGCGGCTGATCTGTGCCTGGGC
AGCGCGACC
dot-bracket secondary structure
.....((.((..(.((((((((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..))))))))))).
.))))....
SIMILARITIES| miRBase mml-mir-210: 3e-57 PMRD no hits microPC no hits | UniProt no hits RFAM mir-210: 9e-36 |
Identical with: mml-mir-210 from miRBase (MNEST027806) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
