ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-192
source: miRBase, original name: ptr-mir-215 (MI0003027)
SEQUENCE & STRUCTURE| miRNA ATGACCTATGAATTGACAGAC miRNA* CTGTCATTTCTTTAGGCCAATA mismatches: 4 bulges: 1 |
pre-miRNA
ATCATTCAGAAATGGTATACGGGAAAATGACCTATGAATTGACAGACAATATAGCTGAGTTTGTCTGTCATTTCTTTAGGCCAATATTCTGTATGACTGT
GCTACTTCAA
dot-bracket secondary structure
........(((.((((((((((((.(.((.((((.(((.((((((((((...........)))))))))).)))..)))).)).).))))))......))
)))).)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ATCATTCAGAAATGGTATACGGGAAAATGACCTATGAATTGACAGACAATATAGCTGAGTTTGTCTGTCATTTCTTTAGGCCAATATTCTGTATGACTGT
GCTACTTCAA
dot-bracket secondary structure
........(((.((((((((((((.(.((.((((.(((.((((((((((...........)))))))))).)))..)))).)).).))))))......))
)))).)))..
SIMILARITIES| miRBase ggo-mir-215: 2e-55 PMRD no hits microPC no hits | UniProt no hits RFAM mir-192: 2e-46 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
