ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-216
source: miRBase, original name: ptr-mir-216a (MI0002862)
SEQUENCE & STRUCTURE| miRNA TTATCTCAGCTGGCAACTGTG miRNA* CAGTGGTCTCTGGGATTAAACTAAACAGAGC mismatches: 2 bulges: 12 |
pre-miRNA
GATGGCTGTGAGTTGGCTTATCTCAGCTGGCAACTGTGAGATGTTCATACAATCCCTCACAGTGGTCTCTGGGATTAAACTAAACAGAGCAATTTCCTAG
CCCTCACGA
dot-bracket secondary structure
((.(((((.(((...(((((((((((..(((.((((((((.(((....)))....)))))))).))).)))))))...........))))...))).)))
)).))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GATGGCTGTGAGTTGGCTTATCTCAGCTGGCAACTGTGAGATGTTCATACAATCCCTCACAGTGGTCTCTGGGATTAAACTAAACAGAGCAATTTCCTAG
CCCTCACGA
dot-bracket secondary structure
((.(((((.(((...(((((((((((..(((.((((((((.(((....)))....)))))))).))).)))))))...........))))...))).)))
)).))....
SIMILARITIES| miRBase ggo-mir-216: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-216: 8e-30 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
