ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-216
source: miRBase, original name: ptr-mir-216b (MI0008582)
SEQUENCE & STRUCTURE| miRNA AAATCTCTGCAGGCAAATGTGA miRNA* ACACACTTACCCGTAGAGATTCTA mismatches: 6 bulges: 2 |
pre-miRNA
GCAGACTGGAAAATCTCTGCAGGCAAATGTGATGTCACTGAGGAAATCACACACTTACCCGTAGAGATTCTACAGTCTGAC
dot-bracket secondary structure
.(((((((...(((((((((.((....((((((.((......)).))))))......)).)))))))))...)))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
GCAGACTGGAAAATCTCTGCAGGCAAATGTGATGTCACTGAGGAAATCACACACTTACCCGTAGAGATTCTACAGTCTGAC
dot-bracket secondary structure
.(((((((...(((((((((.((....((((((.((......)).))))))......)).)))))))))...)))))))..
SIMILARITIES| miRBase hsa-mir-216b: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-216: 9e-29 |
Identical with: hsa-mir-216b from miRBase (MNEST028534) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
