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ABOUT THIS RECORD

ID: MNEST030296
species: Pan troglodytes
miRNA family: mir-219
source: miRBase, original name: ptr-mir-219-1 (MI0008584)







SEQUENCE & STRUCTURE
miRNA
TGATTGTCCAAACGCAATTCT

miRNA*
AGTTGAGTCTGGACGTCCCG

mismatches: 3
bulges: 1

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pre-miRNA
CGCCCCGGGCCGCGGCTCCTGATTGTCCAAACGCAATTCTCGAGTCTATGGCTCCGGCTGAGAGTTGAGTCTGGACGTCCCGAGCCGCCGCCCCCAAACC
TCGAGCGG


dot-bracket secondary structure
(((.(.((((.(((((((..(((.(((((.((.((((((((.((((.........)))))))))))).)).))))))))..))))))).)))).......
..).))).



SIMILARITIES
miRBase ptr-mir-219-1: 1e-56

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-219: 8e-27

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"




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