ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-224
source: miRBase, original name: ptr-mir-224 (MI0002904)
SEQUENCE & STRUCTURE| miRNA CAAGTCACTAGTGGTTCCGTTTA miRNA* AATGGTGCCCTAGTGACTACAA mismatches: 4 bulges: 1 |
pre-miRNA
GGGCTTTCAAGTCACTAGTGGTTCCGTTTAGTAGATGATTGTGCATTGTTTCAAAATGGTGCCCTAGTGACTACAAAGCCC
dot-bracket secondary structure
(((((((..(((((((((.(((.((((((.(.(((..((.....))..)))).)))))).))))))))))))..)))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
GGGCTTTCAAGTCACTAGTGGTTCCGTTTAGTAGATGATTGTGCATTGTTTCAAAATGGTGCCCTAGTGACTACAAAGCCC
dot-bracket secondary structure
(((((((..(((((((((.(((.((((((.(.(((..((.....))..)))).)))))).))))))))))))..)))))))
SIMILARITIES| miRBase mml-mir-224: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-224: 2e-32 |
Identical with: mml-mir-224 from miRBase (MNEST027822) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
