ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-299
source: miRBase, original name: ptr-mir-299 (MI0012563)
SEQUENCE & STRUCTURE| miRNA TGGTTTACCGTCCCACATACAT miRNA* GTATGTGGGACGGTAAACCGCT mismatches: 0 bulges: 0 |
pre-miRNA
AAGAAATGGTTTACCGTCCCACATACATTTTGAATATGTATGTGGGACGGTAAACCGCTTCTTGGTATC
dot-bracket secondary structure
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
AAGAAATGGTTTACCGTCCCACATACATTTTGAATATGTATGTGGGACGGTAAACCGCTTCTTGGTATC
dot-bracket secondary structure
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))......
SIMILARITIES| miRBase rno-mir-3563: 3e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-299: 4e-24 |
Identical with: ppy-mir-299 from miRBase (MNEST030925) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"
