ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-130
source: miRBase, original name: ptr-mir-301b (MI0008598)
SEQUENCE & STRUCTURE| miRNA CAGTGCAATGATATTGTCAAAGC miRNA* TCTGACGAGGTTGCACTACT mismatches: 3 bulges: 3 |
pre-miRNA
CCGCAGGTGCTCTGACGAGGTTGCACTACTGTGCTCTGAGAAGCAGTGCAATGATATTGTCAAAGCATCTGGGACCA
dot-bracket secondary structure
((.((((((((.((((((.((((((((.((...(.....).)).))))))))....)))))).))))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCGCAGGTGCTCTGACGAGGTTGCACTACTGTGCTCTGAGAAGCAGTGCAATGATATTGTCAAAGCATCTGGGACCA
dot-bracket secondary structure
((.((((((((.((((((.((((((((.((...(.....).)).))))))))....)))))).))))))))))....
SIMILARITIES| miRBase mml-mir-301b: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ppy-mir-301b from miRBase (MNEST030927) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
