ABOUT THIS RECORDspecies: Pan troglodytes
miRNA family: mir-302
source: miRBase, original name: ptr-mir-302c (MI0008601)
SEQUENCE & STRUCTURE| miRNA TAAGTGCTTCCATGTTTCAGTGG miRNA* GCTTTAACATGGGGGTACCTGCT mismatches: 5 bulges: 0 |
pre-miRNA
CCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAG
dot-bracket secondary structure
.(((..((..(((((((((((((.((((.((.....))..)))).)))))))))))))..))..)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
CCTTTGCTTTAACATGGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGGAG
dot-bracket secondary structure
.(((..((..(((((((((((((.((((.((.....))..)))).)))))))))))))..))..)))
SIMILARITIES| miRBase mml-mir-302c: 2e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-302: 2e-26 |
Identical with: ppy-mir-302c from miRBase (MNEST030929) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Baev V, Daskalova E, Minkov I, Comput Biol Chem. 33:62-70(2009)., "Computational identification of novel microRNA homologs in the chimpanzee genome"
